STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU77470.1Hypothetical protein. (658 aa)    
Predicted Functional Partners:
EKU77469.1
TonB family domain-containing protein.
 
 
 0.843
EKU77467.1
Hypothetical protein.
 
  
 0.787
EKU77472.1
Hypothetical protein.
 
    0.731
EKU77949.1
Hypothetical protein.
  
     0.718
EKU77468.1
Hypothetical protein.
 
  
 0.699
EKU77955.1
Hypothetical protein.
  
   
 0.666
EKU78406.1
Hypothetical protein.
 
    0.653
EKU79372.1
TonB family domain-containing protein.
 
 
 0.643
EKU78777.1
Hypothetical protein.
 
 
 0.643
EKU78768.1
Hypothetical protein.
    
   0.642
Your Current Organism:
Veillonella seminalis
NCBI taxonomy Id: 883156
Other names: V. seminalis ACS-216-V-Col6b, Veillonella ratti ACS-216-V-Col6b, Veillonella seminalis ACS-216-V-Col6b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.