STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mprFHypothetical protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms. (340 aa)    
Predicted Functional Partners:
EKU77628.1
Hopanoid biosynthesis associated protein HpnK.
       0.804
EKU77630.1
Hypothetical protein; Belongs to the UPF0735 family.
       0.787
EKU77949.1
Hypothetical protein.
  
     0.764
EKU79334.1
Hypothetical protein.
  
 
 0.758
EKU79293.1
Hypothetical protein.
  
     0.713
EKU77983.1
Hypothetical protein.
  
     0.670
EKU77470.1
Hypothetical protein.
  
     0.634
EKU77979.1
Hypothetical protein.
  
     0.618
EKU79379.1
Hypothetical protein.
  
    0.607
EKU79381.1
Hypothetical protein.
  
    0.602
Your Current Organism:
Veillonella seminalis
NCBI taxonomy Id: 883156
Other names: V. seminalis ACS-216-V-Col6b, Veillonella ratti ACS-216-V-Col6b, Veillonella seminalis ACS-216-V-Col6b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.