STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU77748.1Hypothetical protein. (680 aa)    
Predicted Functional Partners:
EKU77747.1
Polysaccharide pyruvyl transferase CsaB.
 
    0.946
EKU77749.1
Hypothetical protein.
       0.790
prfB
Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
  
    0.773
EKU79373.1
Hypothetical protein.
  
     0.770
EKU79379.1
Hypothetical protein.
  
     0.769
EKU79381.1
Hypothetical protein.
  
     0.767
EKU79380.1
Hypothetical protein.
  
     0.766
EKU79293.1
Hypothetical protein.
  
     0.759
EKU77961.1
Hypothetical protein.
  
     0.756
EKU77980.1
Hypothetical protein.
  
     0.755
Your Current Organism:
Veillonella seminalis
NCBI taxonomy Id: 883156
Other names: V. seminalis ACS-216-V-Col6b, Veillonella ratti ACS-216-V-Col6b, Veillonella seminalis ACS-216-V-Col6b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.