STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU77752.1YaeC family lipoprotein. (276 aa)    
Predicted Functional Partners:
EKU77753.1
Hypothetical protein.
 
 0.995
EKU78093.1
Hypothetical protein.
 
 0.991
EKU77754.1
Hypothetical protein.
 
  0.991
metN
D-methionine ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
  0.987
EKU77755.1
Hypothetical protein.
 
  0.977
EKU78899.1
YaeC family lipoprotein; Belongs to the nlpA lipoprotein family.
  
  
 
0.644
EKU78050.1
YaeC family lipoprotein; Belongs to the nlpA lipoprotein family.
  
  
 
0.638
EKU78051.1
YaeC family lipoprotein; Belongs to the nlpA lipoprotein family.
  
  
 
0.613
EKU78241.1
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase.
  
    0.422
secA
Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.
  
    0.421
Your Current Organism:
Veillonella seminalis
NCBI taxonomy Id: 883156
Other names: V. seminalis ACS-216-V-Col6b, Veillonella ratti ACS-216-V-Col6b, Veillonella seminalis ACS-216-V-Col6b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.