hpf protein (Veillonella seminalis) - STRING interaction network

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hpf

Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. (176 aa)

Predicted Functional Partners:

rpmC

0.925

rpsU

0.896

rplC

0.892

rpmA

0.890

rpsI

0.890

rpmH

0.889

rpsF

0.888

rplI

0.886

rpsE

0.886

rplO

0.886

Your Current Organism:

Veillonella seminalis

NCBI taxonomy Id: 883156
Other names: V. seminalis ACS-216-V-Col6b, Veillonella ratti ACS-216-V-Col6b, Veillonella seminalis ACS-216-V-Col6b

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
hpf	rplC	HMPREF9282_01974	HMPREF9282_00753	Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.892
hpf	rplI	HMPREF9282_01974	HMPREF9282_00440	Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	Ribosomal protein L9; Binds to the 23S rRNA.	0.886
hpf	rplO	HMPREF9282_01974	HMPREF9282_00772	Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.886
hpf	rpmA	HMPREF9282_01974	HMPREF9282_00223	Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.890
hpf	rpmC	HMPREF9282_01974	HMPREF9282_00761	Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.	0.925
hpf	rpmH	HMPREF9282_01974	HMPREF9282_00355	Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.889
hpf	rpsE	HMPREF9282_01974	HMPREF9282_00770	Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.	0.886
hpf	rpsF	HMPREF9282_01974	HMPREF9282_00311	Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.888
hpf	rpsI	HMPREF9282_01974	HMPREF9282_00890	Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.890
hpf	rpsU	HMPREF9282_01974	HMPREF9282_01817	Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.896
rplC	hpf	HMPREF9282_00753	HMPREF9282_01974	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	0.892
rplC	rplI	HMPREF9282_00753	HMPREF9282_00440	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L9; Binds to the 23S rRNA.	0.992
rplC	rplO	HMPREF9282_00753	HMPREF9282_00772	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.999
rplC	rpmA	HMPREF9282_00753	HMPREF9282_00223	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.994
rplC	rpmC	HMPREF9282_00753	HMPREF9282_00761	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.	0.998
rplC	rpmH	HMPREF9282_00753	HMPREF9282_00355	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.936
rplC	rpsE	HMPREF9282_00753	HMPREF9282_00770	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.	0.996
rplC	rpsF	HMPREF9282_00753	HMPREF9282_00311	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.993
rplC	rpsI	HMPREF9282_00753	HMPREF9282_00890	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.995
rplC	rpsU	HMPREF9282_00753	HMPREF9282_01817	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.926

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