STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKU77373.1VirB4 family type IV secretion/conjugal transfer ATPase. (828 aa)    
Predicted Functional Partners:
EKU77386.1
Hypothetical protein.
 
 0.991
EKU77371.1
Hypothetical protein.
 
  
 0.975
EKU77388.1
Hypothetical protein.
 
 
 0.971
EKU77389.1
Hypothetical protein.
 
  
 0.920
EKU77383.1
Hypothetical protein.
 
  
 0.902
EKU77385.1
Hypothetical protein.
 
  
 0.836
EKU77394.1
Hypothetical protein.
 
     0.747
EKU77372.1
Hypothetical protein.
       0.718
EKU77374.1
Hypothetical protein.
       0.608
EKU77375.1
Hypothetical protein.
       0.473
Your Current Organism:
Veillonella seminalis
NCBI taxonomy Id: 883156
Other names: V. seminalis ACS-216-V-Col6b, Veillonella ratti ACS-216-V-Col6b, Veillonella seminalis ACS-216-V-Col6b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.