Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO72750.1Hypothetical protein. (464 aa)    
Predicted Functional Partners:
EHO71583.1
Hypothetical protein.
  
 
 0.864
EHO68846.1
Hypothetical protein.
  
 
 0.864
EHO66830.1
Hypothetical protein.
  
 
 0.862
dacA
Hypothetical protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.
   
 
 0.786
EHO72751.1
Hypothetical protein.
       0.783
glmS
Glucosamine-fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
  
 
 0.707
EHO71174.1
Glucosamine-6-phosphate deaminase-like protein.
 
  
 0.657
EHO72752.1
Hypothetical protein.
  
    0.585
EHO72749.1
Hypothetical protein.
       0.581
EHO67099.1
Hypothetical protein.
 
 
 0.567
Your Current Organism:
Prevotella micans
NCBI taxonomy Id: 883158
Other names: P. micans F0438, Prevotella micans F0438
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