Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO72878.1Hypothetical protein. (239 aa)    
Predicted Functional Partners:
EHO70314.1
Hypothetical protein; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 0.994
EHO67857.1
Hypothetical protein.
 
 
 
 0.806
EHO72877.1
Hypothetical protein; Belongs to the aspartokinase family.
       0.753
EHO72876.1
Hypothetical protein.
       0.723
EHO72875.1
Hypothetical protein.
       0.719
EHO72563.1
Hypothetical protein.
   
 
 0.714
rplN
50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
  
     0.598
rpsI
30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
     0.506
EHO67887.1
Hypothetical protein.
  
  
 
0.505
EHO70349.1
Hypothetical protein.
 
   
 0.488
Your Current Organism:
Prevotella micans
NCBI taxonomy Id: 883158
Other names: P. micans F0438, Prevotella micans F0438
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