Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO71558.1Hypothetical protein. (554 aa)    
Predicted Functional Partners:
EHO74364.1
Hypothetical protein.
  
  
 
0.881
EHO72790.1
Hypothetical protein.
    
  0.875
EHO70624.1
Hypothetical protein.
  
 0.636
EHO71524.1
Hypothetical protein.
  
 
  0.553
EHO71559.1
RNA polymerase sigma-54 factor.
  
    0.535
EHO71560.1
Hypothetical protein.
  
 
  0.513
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
   
  0.473
purE
AIR carboxylase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
       0.473
EHO67103.1
Hypothetical protein.
  
 
 0.469
EHO74376.1
Hypothetical protein.
   
 
 0.467
Your Current Organism:
Prevotella micans
NCBI taxonomy Id: 883158
Other names: P. micans F0438, Prevotella micans F0438
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