Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO71620.1Hypothetical protein. (119 aa)    
Predicted Functional Partners:
EHO71624.1
Hypothetical protein.
  
    0.598
EHO71621.1
Hypothetical protein.
       0.517
EHO71622.1
Hypothetical protein.
       0.513
EHO71623.1
Hypothetical protein.
       0.513
EHO71616.1
Hypothetical protein.
       0.438
EHO71617.1
Hypothetical protein.
       0.438
EHO71618.1
Hypothetical protein.
       0.438
EHO71619.1
Hypothetical protein.
       0.438
Your Current Organism:
Prevotella micans
NCBI taxonomy Id: 883158
Other names: P. micans F0438, Prevotella micans F0438
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