Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO71228.1Hypothetical protein. (1093 aa)    
Predicted Functional Partners:
EHO71227.1
Hypothetical protein.
 
     0.950
EHO71232.1
Hypothetical protein.
 
     0.891
EHO71229.1
Hypothetical protein.
       0.718
EHO71230.1
Hypothetical protein.
       0.718
EHO71226.1
Hypothetical protein.
       0.697
EHO71231.1
Hypothetical protein.
       0.622
EHO71234.1
Hypothetical protein.
 
     0.562
EHO71225.1
Hypothetical protein; Belongs to the 'phage' integrase family.
       0.461
Your Current Organism:
Prevotella micans
NCBI taxonomy Id: 883158
Other names: P. micans F0438, Prevotella micans F0438
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