Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO71265.1Hypothetical protein. (270 aa)    
Predicted Functional Partners:
EHO71266.1
RsmD family RNA methyltransferase.
  
    0.833
EHO75060.1
Hypothetical protein.
  
     0.772
EHO72797.1
Hypothetical protein.
  
     0.772
EHO71516.1
Hypothetical protein.
  
     0.772
EHO70644.1
Hypothetical protein.
  
     0.772
EHO71603.1
Hypothetical protein.
  
     0.771
EHO66959.1
Hypothetical protein.
  
     0.771
EHO72846.1
Hypothetical protein.
  
     0.768
EHO72325.1
Hypothetical protein.
  
    0.768
EHO68564.1
Hypothetical protein.
  
     0.762
Your Current Organism:
Prevotella micans
NCBI taxonomy Id: 883158
Other names: P. micans F0438, Prevotella micans F0438
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