Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO68514.1Hypothetical protein. (517 aa)    
Predicted Functional Partners:
EHO68515.1
Transcriptional regulatory protein rprY.
 
  0.977
EHO67103.1
Hypothetical protein.
  
 0.842
EHO74376.1
Hypothetical protein.
  
 0.826
EHO68526.1
Hypothetical protein.
  
 0.649
EHO68538.1
Hypothetical protein.
  
 0.649
EHO73463.1
Hypothetical protein.
   
 0.626
EHO71852.1
Hypothetical protein.
  
     0.526
EHO72325.1
Hypothetical protein.
  
     0.524
EHO71149.1
Hypothetical protein.
  
 
  0.519
EHO74961.1
Hypothetical protein.
  
  
  0.449
Your Current Organism:
Prevotella micans
NCBI taxonomy Id: 883158
Other names: P. micans F0438, Prevotella micans F0438
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