Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO68070.1Hypothetical protein. (401 aa)    
Predicted Functional Partners:
EHO68719.1
Fumarate hydratase class I, aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
  0.557
EHO68071.1
Anaerobic ribonucleoside-triphosphate reductase.
       0.522
EHO68072.1
Anaerobic ribonucleoside-triphosphate reductase activating protein.
       0.522
EHO69621.1
Hypothetical protein.
  
     0.514
EHO72560.1
Hypothetical protein.
  
     0.450
EHO69558.1
Hypothetical protein.
  
     0.443
EHO75017.1
Hypothetical protein.
  
     0.424
Your Current Organism:
Prevotella micans
NCBI taxonomy Id: 883158
Other names: P. micans F0438, Prevotella micans F0438
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