STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPD33796.1Hypothetical protein. (149 aa)    
Predicted Functional Partners:
EPD33795.1
Hypothetical protein.
       0.773
EPD33790.1
Hypothetical protein.
       0.709
EPD33791.1
Hypothetical protein.
       0.709
EPD33792.1
Hypothetical protein.
       0.709
EPD33793.1
Hypothetical protein.
       0.709
EPD33794.1
Hypothetical protein.
       0.709
EPD33797.1
Hypothetical protein.
       0.566
EPD33798.1
Hypothetical protein.
       0.566
EPD33789.1
Hypothetical protein.
       0.524
Your Current Organism:
Propionimicrobium lymphophilum
NCBI taxonomy Id: 883161
Other names: P. lymphophilum ACS-093-V-SCH5, Propionimicrobium lymphophilum ACS-093-V-SCH5
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