STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPD33837.1Hypothetical protein. (181 aa)    
Predicted Functional Partners:
EPD33836.1
Hypothetical protein.
       0.773
EPD33142.1
Hypothetical protein.
  
     0.759
EPD33086.1
Exonuclease, DNA polymerase III, epsilon subunit.
 
     0.672
EPD33882.1
Hypothetical protein.
 
  
 0.664
EPD34090.1
Hypothetical protein.
  
     0.625
EPD33045.1
Hypothetical protein.
  
     0.620
rbpA
Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.
 
     0.612
EPD33117.1
Hypothetical protein.
  
     0.606
EPD33486.1
Hypothetical protein.
  
     0.564
EPD34021.1
Hypothetical protein.
  
     0.560
Your Current Organism:
Propionimicrobium lymphophilum
NCBI taxonomy Id: 883161
Other names: P. lymphophilum ACS-093-V-SCH5, Propionimicrobium lymphophilum ACS-093-V-SCH5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.