STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPD33601.1Hypothetical protein. (326 aa)    
Predicted Functional Partners:
EPD33604.1
Hypothetical protein.
 
     0.887
EPD33602.1
HAD hydrolase, family IIA.
 
     0.879
EPD33603.1
FGGY-family pentulose kinase; Belongs to the FGGY kinase family.
 
     0.812
EPD33096.1
Hypothetical protein.
 
     0.765
EPD32310.1
Hypothetical protein; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
     0.705
EPD32549.1
Hypothetical protein; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
     0.688
EPD33436.1
NifC-like ABC-type porter.
  
     0.560
EPD33605.1
RpiB/LacA/LacB family sugar-phosphate isomerase.
       0.554
EPD32550.1
Hypothetical protein.
  
     0.520
EPD33095.1
Hypothetical protein; Belongs to the FGGY kinase family.
  
     0.429
Your Current Organism:
Propionimicrobium lymphophilum
NCBI taxonomy Id: 883161
Other names: P. lymphophilum ACS-093-V-SCH5, Propionimicrobium lymphophilum ACS-093-V-SCH5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.