STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPD33644.1Hypothetical protein. (79 aa)    
Predicted Functional Partners:
EPD33646.1
Hypothetical protein; Belongs to the N(4)/N(6)-methyltransferase family.
 
  
 0.835
EPD33645.1
Hypothetical protein.
       0.801
EPD33635.1
HK97 gp10 family phage protein.
 
     0.725
EPD33634.1
Hypothetical protein.
 
     0.720
EPD33628.1
Phi13 family phage major tail protein.
 
     0.708
EPD33636.1
Hypothetical protein.
 
     0.694
EPD33627.1
Hypothetical protein.
 
     0.679
EPD33647.1
Methionine adenosyltransferase; Belongs to the AdoMet synthase family.
       0.631
EPD33642.1
Hypothetical protein.
 
    0.577
EPD33638.1
HK97 family phage major capsid protein.
 
     0.561
Your Current Organism:
Propionimicrobium lymphophilum
NCBI taxonomy Id: 883161
Other names: P. lymphophilum ACS-093-V-SCH5, Propionimicrobium lymphophilum ACS-093-V-SCH5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.