STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPD33707.1Hypothetical protein. (171 aa)    
Predicted Functional Partners:
EPD33426.1
Hypothetical protein.
  
 
 0.795
EPD32325.1
Hypothetical protein.
  
 
 0.723
EPD33903.1
Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase.
 
 
 0.720
EPD33192.1
Riboflavin biosynthesis protein RibF; Belongs to the ribF family.
    
 0.699
EPD32126.1
Hypothetical protein.
    
  0.697
EPD32127.1
Hypothetical protein.
    
  0.697
cobT
Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
  
 
 0.605
EPD32509.1
Precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit.
     
 0.597
EPD32510.1
precorrin-3B C17-methyltransferase.
     
 0.597
EPD34033.1
Hypothetical protein.
   
   0.540
Your Current Organism:
Propionimicrobium lymphophilum
NCBI taxonomy Id: 883161
Other names: P. lymphophilum ACS-093-V-SCH5, Propionimicrobium lymphophilum ACS-093-V-SCH5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.