STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPD33022.1Hypothetical protein. (308 aa)    
Predicted Functional Partners:
EPD33023.1
Hypothetical protein.
 
 0.997
EPD33024.1
Hypothetical protein; Belongs to the ABC transporter superfamily.
 
 0.991
EPD33021.1
Hypothetical protein.
 
 0.988
EPD32720.1
Hypothetical protein.
 
 0.979
EPD32722.1
Hypothetical protein.
 
 0.979
EPD32721.1
Hypothetical protein.
 
 0.965
EPD34064.1
Hypothetical protein.
 
 0.955
EPD34066.1
Hypothetical protein.
 0.951
EPD34063.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain; Belongs to the ABC transporter superfamily.
 
 0.934
EPD32724.1
Hypothetical protein.
 0.927
Your Current Organism:
Propionimicrobium lymphophilum
NCBI taxonomy Id: 883161
Other names: P. lymphophilum ACS-093-V-SCH5, Propionimicrobium lymphophilum ACS-093-V-SCH5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.