STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPD33069.1SrtB family sortase. (214 aa)    
Predicted Functional Partners:
EPD33068.1
Hypothetical protein.
 
     0.882
EPD33071.1
Hypothetical protein.
 
     0.833
EPD33067.1
Hypothetical protein.
       0.605
EPD33070.1
Hypothetical protein.
       0.561
EPD33386.1
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
     0.561
EPD33501.1
YhgE/Pip domain-containing protein; Overlaps another CDS with the same product name.
  
     0.459
EPD33502.1
YhgE/Pip domain-containing protein; Overlaps another CDS with the same product name.
  
     0.440
EPD33114.1
Hypothetical protein.
  
     0.418
EPD33736.1
YhgE/Pip domain-containing protein.
  
     0.411
EPD32834.1
Hypothetical protein.
  
     0.409
Your Current Organism:
Propionimicrobium lymphophilum
NCBI taxonomy Id: 883161
Other names: P. lymphophilum ACS-093-V-SCH5, Propionimicrobium lymphophilum ACS-093-V-SCH5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.