STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPD33095.1Hypothetical protein; Belongs to the FGGY kinase family. (507 aa)    
Predicted Functional Partners:
EPD32845.1
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
 
  
 0.770
EPD32311.1
L-ribulose-5-phosphate 4-epimerase.
  
 
 0.695
EPD32458.1
L-ribulose-5-phosphate 4-epimerase.
  
 
 0.695
EPD33604.1
Hypothetical protein.
 
  
  0.663
EPD33341.1
Hypothetical protein; Belongs to the FGGY kinase family.
  
  
 
0.651
EPD33096.1
Hypothetical protein.
 
  
  0.628
EPD33094.1
Hypothetical protein.
       0.574
pgl
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
   
  0.554
EPD33448.1
6-phosphogluconate dehydrogenase (decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
    
 0.542
ilvD
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
     
 0.521
Your Current Organism:
Propionimicrobium lymphophilum
NCBI taxonomy Id: 883161
Other names: P. lymphophilum ACS-093-V-SCH5, Propionimicrobium lymphophilum ACS-093-V-SCH5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.