STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPD33367.1Pyruvate:ferredoxin (flavodoxin) oxidoreductase. (1214 aa)    
Predicted Functional Partners:
EPD32408.1
2-oxoacid:acceptor oxidoreductase, alpha subunit.
  
 0.999
EPD32409.1
Hypothetical protein.
  
0.999
nuoI
NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 0.999
EPD32504.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
 
0.999
EPD32505.1
Hypothetical protein.
 0.999
EPD34028.1
Phosphate acetyltransferase.
   
 0.995
EPD34040.1
Hypothetical protein.
  
 
 0.994
EPD33101.1
Hypothetical protein.
  
 
 0.994
EPD32142.1
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
  
 
 0.994
EPD32434.1
NADH-quinone oxidoreductase, E subunit.
   
 0.994
Your Current Organism:
Propionimicrobium lymphophilum
NCBI taxonomy Id: 883161
Other names: P. lymphophilum ACS-093-V-SCH5, Propionimicrobium lymphophilum ACS-093-V-SCH5
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