STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPD33491.1Isocitrate dehydrogenase, NADP-dependent; Belongs to the monomeric-type IDH family. (737 aa)    
Predicted Functional Partners:
EPD33367.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 
 0.993
EPD32504.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 
 0.993
EPD32408.1
2-oxoacid:acceptor oxidoreductase, alpha subunit.
  
 
 0.956
EPD33477.1
Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
 
 
 0.954
EPD32261.1
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
   
  0.889
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
  
  
 0.886
EPD32409.1
Hypothetical protein.
  
 
  0.886
EPD33830.1
Hypothetical protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.871
EPD32672.1
Hypothetical protein.
   
 
 0.858
EPD32338.1
Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
  0.855
Your Current Organism:
Propionimicrobium lymphophilum
NCBI taxonomy Id: 883161
Other names: P. lymphophilum ACS-093-V-SCH5, Propionimicrobium lymphophilum ACS-093-V-SCH5
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