STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPD32629.1Hypothetical protein. (257 aa)    
Predicted Functional Partners:
EPD32628.1
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.994
EPD32627.1
Hypothetical protein.
 
  0.985
EPD32532.1
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.971
EPD33767.1
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.964
EPD33780.1
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.964
EPD33768.1
Hypothetical protein.
 
  0.895
EPD32530.1
Hypothetical protein.
 0.881
EPD33779.1
Hypothetical protein.
 
  0.852
cobQ
Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
   
  0.755
EPD32721.1
Hypothetical protein.
 
     
0.649
Your Current Organism:
Propionimicrobium lymphophilum
NCBI taxonomy Id: 883161
Other names: P. lymphophilum ACS-093-V-SCH5, Propionimicrobium lymphophilum ACS-093-V-SCH5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.