STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPD31892.1HK97 family phage prohead protease. (511 aa)    
Predicted Functional Partners:
EPD31895.1
Hypothetical protein.
 
     0.917
EPD31893.1
HK97 family phage portal protein.
 
     0.867
EPD31889.1
Hypothetical protein.
       0.787
EPD31891.1
Hypothetical protein.
       0.784
EPD31890.1
Hypothetical protein.
       0.773
EPD31888.1
Hypothetical protein.
       0.762
EPD31887.1
Hypothetical protein.
       0.746
EPD31882.1
Hypothetical protein.
 
     0.743
EPD33994.1
Hypothetical protein.
  
     0.729
EPD33808.1
Hypothetical protein.
 
     0.679
Your Current Organism:
Propionimicrobium lymphophilum
NCBI taxonomy Id: 883161
Other names: P. lymphophilum ACS-093-V-SCH5, Propionimicrobium lymphophilum ACS-093-V-SCH5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.