STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPD32038.1Hypothetical protein. (1001 aa)    
Predicted Functional Partners:
EPD34067.1
Hypothetical protein.
  
  0.650
EPD33028.1
Hypothetical protein.
    
   0.597
EPD32039.1
Hypothetical protein.
       0.596
EPD32315.1
Hypothetical protein.
    
   0.596
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
   0.559
EPD32640.1
Hypothetical protein.
    
  0.522
EPD33313.1
Hypothetical protein.
    
   0.509
EPD32856.1
Hypothetical protein.
    
   0.509
EPD32912.1
Hypothetical protein.
    
   0.509
EPD33923.1
Hypothetical protein.
    
   0.461
Your Current Organism:
Propionimicrobium lymphophilum
NCBI taxonomy Id: 883161
Other names: P. lymphophilum ACS-093-V-SCH5, Propionimicrobium lymphophilum ACS-093-V-SCH5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.