STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPD32202.1Hypothetical protein. (261 aa)    
Predicted Functional Partners:
EPD33117.1
Hypothetical protein.
  
 
 0.929
EPD34024.1
Hypothetical protein.
 
     0.813
EPD34021.1
Hypothetical protein.
 
     0.812
EPD34023.1
Hypothetical protein.
 
     0.797
EPD34020.1
Hypothetical protein.
 
     0.787
EPD33276.1
Hypothetical protein.
  
  
 0.786
EPD32203.1
Hypothetical protein.
       0.773
EPD34016.1
Hypothetical protein.
 
     0.759
tatC
Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.
    
 
 0.740
crgA
Hypothetical protein; Involved in cell division; Belongs to the CrgA family.
  
     0.734
Your Current Organism:
Propionimicrobium lymphophilum
NCBI taxonomy Id: 883161
Other names: P. lymphophilum ACS-093-V-SCH5, Propionimicrobium lymphophilum ACS-093-V-SCH5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.