STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPD32405.1TIGR03085 family protein. (210 aa)    
Predicted Functional Partners:
EPD32504.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
   
 
 0.933
EPD33367.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 
 0.911
EPD34031.1
Dimethylsulfoxide reductase, chain B.
  
 0.844
EPD33566.1
Dimethylsulfoxide reductase, chain B.
  
 0.844
tuf
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.821
EPD32408.1
2-oxoacid:acceptor oxidoreductase, alpha subunit.
  
 
 0.787
EPD32505.1
Hypothetical protein.
    
 0.746
EPD34005.1
Hypothetical protein.
  
     0.714
EPD33361.1
Hypothetical protein.
  
     0.700
EPD33508.1
Nitrate reductase, beta subunit.
   
 0.632
Your Current Organism:
Propionimicrobium lymphophilum
NCBI taxonomy Id: 883161
Other names: P. lymphophilum ACS-093-V-SCH5, Propionimicrobium lymphophilum ACS-093-V-SCH5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.