STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPD32411.1Hypothetical protein. (615 aa)    
Predicted Functional Partners:
EPD32413.1
Hypothetical protein.
 
 
 0.978
EPD32412.1
Hypothetical protein; Belongs to the ABC transporter superfamily.
  
  0.934
EPD34068.1
Hypothetical protein.
 
 0.870
EPD34070.1
ABC transporter periplasmic binding protein, thiB subfamily.
 
 
  0.854
EPD32552.1
Hypothetical protein.
 
 0.838
EPD32554.1
Hypothetical protein.
 
 
 0.830
EPD34052.1
Hypothetical protein; Belongs to the ABC transporter superfamily.
  
  0.643
EPD32415.1
Hypothetical protein.
 
     0.632
EPD32414.1
Hypothetical protein.
 
     0.617
EPD33436.1
NifC-like ABC-type porter.
  
 
 
0.603
Your Current Organism:
Propionimicrobium lymphophilum
NCBI taxonomy Id: 883161
Other names: P. lymphophilum ACS-093-V-SCH5, Propionimicrobium lymphophilum ACS-093-V-SCH5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.