Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPD32441.1Hypothetical protein. (594 aa)    
Predicted Functional Partners:
EPD32442.1
Hypothetical protein.
 
     0.956
EPD32444.1
Hypothetical protein.
 
     0.901
EPD34016.1
Hypothetical protein.
  
     0.772
EPD33611.1
Hypothetical protein.
  
     0.772
EPD33083.1
Hypothetical protein.
  
     0.770
EPD32375.1
Hypothetical protein.
  
     0.768
EPD32231.1
Hypothetical protein.
  
     0.763
EPD33820.1
Hypothetical protein.
  
     0.761
EPD34020.1
Hypothetical protein.
  
     0.758
EPD33476.1
Hypothetical protein.
  
     0.757
Your Current Organism:
Propionimicrobium lymphophilum
NCBI taxonomy Id: 883161
Other names: P. lymphophilum ACS-093-V-SCH5, Propionimicrobium lymphophilum ACS-093-V-SCH5
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