Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPD32493.1Hypothetical protein. (69 aa)    
Predicted Functional Partners:
EPD32492.1
Heavy metal translocating P-type ATPase.
 
 
 0.987
EPD32494.1
Hypothetical protein.
  
  
 0.821
EPD33084.1
Hypothetical protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
   0.731
EPD33100.1
Hypothetical protein; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
     
 0.544
EPD33409.1
Hypothetical protein.
     
 0.513
EPD32833.1
Hypothetical protein.
    
   0.483
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
   
 
 0.471
EPD32491.1
Hypothetical protein.
       0.430
EPD33822.1
Hypothetical protein; Belongs to the Dps family.
  
  
 0.423
EPD32625.1
Cation diffusion facilitator family transporter.
 
   
 0.408
Your Current Organism:
Propionimicrobium lymphophilum
NCBI taxonomy Id: 883161
Other names: P. lymphophilum ACS-093-V-SCH5, Propionimicrobium lymphophilum ACS-093-V-SCH5
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