STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPD32517.1Hypothetical protein. (358 aa)    
Predicted Functional Partners:
EPD33367.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
  0.860
EPD32504.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
  0.850
EPD32516.1
precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit.
       0.773
EPD32408.1
2-oxoacid:acceptor oxidoreductase, alpha subunit.
    
  0.668
EPD32515.1
uroporphyrinogen-III C-methyltransferase.
       0.551
EPD33606.1
methylmalonyl-CoA carboxyltransferase 5S subunit.
   
 
  0.538
ribA
GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
       0.418
EPD34028.1
Phosphate acetyltransferase.
       0.403
Your Current Organism:
Propionimicrobium lymphophilum
NCBI taxonomy Id: 883161
Other names: P. lymphophilum ACS-093-V-SCH5, Propionimicrobium lymphophilum ACS-093-V-SCH5
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