STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPD32533.1FGGY-family pentulose kinase; Belongs to the FGGY kinase family. (511 aa)    
Predicted Functional Partners:
EPD32845.1
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
 
   
  0.790
EPD32535.1
Hypothetical protein.
 
     0.749
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
       0.685
EPD32536.1
Hypothetical protein.
 
  
  0.637
EPD32311.1
L-ribulose-5-phosphate 4-epimerase.
 
 
 0.623
EPD32458.1
L-ribulose-5-phosphate 4-epimerase.
  
 
 0.584
EPD33604.1
Hypothetical protein.
 
    0.576
EPD33096.1
Hypothetical protein.
 
    0.563
EPD32460.1
Hypothetical protein; Belongs to the FGGY kinase family.
 
 
0.435
EPD32550.1
Hypothetical protein.
 
 
0.429
Your Current Organism:
Propionimicrobium lymphophilum
NCBI taxonomy Id: 883161
Other names: P. lymphophilum ACS-093-V-SCH5, Propionimicrobium lymphophilum ACS-093-V-SCH5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.