STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FEM1AFem-1 homolog A. (682 aa)    
Predicted Functional Partners:
UBXN7
UBX domain-containing protein 7.
    
 0.885
CUL2
Cullin 2; Belongs to the cullin family.
    
 0.873
RBX1
Ring-box 1.
    
 0.766
ELOC
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.680
MLF1
Myeloid leukemia factor 1.
    
 
 0.635
FEM1B
Fem-1 homolog B.
  
  
0.622
DUSP15
Tyrosine-protein phosphatase domain-containing protein.
    
 0.622
ZNF362
Zinc finger protein 362.
    
 0.620
COMMD1
Copper metabolism domain containing 1.
    
  0.619
ENSAPLP00000020656
SGTA_dimer domain-containing protein.
   
 0.616
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.