STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CISD2CDGSH iron sulfur domain 2. (101 aa)    
Predicted Functional Partners:
U3J4H5_ANAPP
IGc1 domain-containing protein.
   
 0.774
TIMM10B
zf-Tim10_DDP domain-containing protein.
   
 0.774
TIMM9
zf-Tim10_DDP domain-containing protein.
   
 0.774
NDUFA8
NADH:ubiquinone oxidoreductase subunit A8.
   
 
 0.670
SLU7
SLU7 homolog, splicing factor.
    
 0.665
U3J097_ANAPP
Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
   
 0.648
ENSAPLP00000018166
Uncharacterized protein.
   
 0.648
FDX1
Ferredoxin 1.
   
 
 0.577
PRKRIP1
PRKR interacting protein 1.
    
 0.573
ENSAPLP00000030867
Uncharacterized protein.
   
 
 0.561
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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