STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLEKHH1Pleckstrin homology, MyTH4 and FERM domain containing H1. (1311 aa)    
Predicted Functional Partners:
ARHGEF5
Uncharacterized protein.
      
 0.610
SEC14L1
SEC14 like lipid binding 1.
      
 0.586
FNBP1L
Formin binding protein 1 like.
      
 0.558
SLC6A8
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
      
 0.483
PKP4
Plakophilin 4.
      
 0.477
RAD51B
RAD51 paralog B.
      
 0.465
SLC39A9
Solute carrier family 39 member 9.
      
 0.430
ZFYVE26
Zinc finger FYVE-type containing 26.
      
 0.424
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.