STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRDM6PR/SET domain 6. (589 aa)    
Predicted Functional Partners:
SMYD2
SET and MYND domain containing 2.
    
 0.664
CEBPG
CCAAT enhancer binding protein gamma.
      
 0.632
SHISA8
Uncharacterized protein.
      
 0.627
ADGRD2
Uncharacterized protein.
   
  
 0.613
CBFA2T2
CBFA2/RUNX1 partner transcriptional co-repressor 2.
    
   0.578
PRDM14
PR/SET domain 14.
    
 
0.574
PI15
Peptidase inhibitor 15; Belongs to the CRISP family.
   
  
 0.492
SLC6A15
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
   
  
 0.480
PRUNE2
Prune homolog 2 with BCH domain.
      
 0.477
CDC42EP3
CDC42 effector protein 3.
      
 0.475
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.