STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1QL3Complement C1q like 3. (255 aa)    
Predicted Functional Partners:
C8A
Complement C8 alpha chain.
     
 0.639
TLX1
T cell leukemia homeobox 1.
     
 0.632
GPR158
G protein-coupled receptor 158.
      
 0.602
KCTD20
Potassium channel tetramerization domain containing 20.
      
 0.550
CDH9
Cadherin 9; Cadherins are calcium-dependent cell adhesion proteins.
     
 0.548
SCUBE2
Signal peptide, CUB domain and EGF like domain containing 2.
    
 0.500
SCUBE1
Signal peptide, CUB domain and EGF like domain containing 1.
    
 0.497
HPCAL1
Uncharacterized protein.
    
 
 0.489
NRXN1
Neurexin 1.
    
 
 0.471
SV2B
Synaptic vesicle glycoprotein 2B.
     
 0.463
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.