STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCHR1Melanin concentrating hormone receptor 1. (360 aa)    
Predicted Functional Partners:
PMCH
Pro-melanin concentrating hormone.
     
 0.974
U3I0P0_ANAPP
G_PROTEIN_RECEP_F1_2 domain-containing protein.
  
  
 
0.901
PYROXD1
Pyridine nucleotide-disulphide oxidoreductase domain 1.
      
 0.664
FADS6
Fatty acid desaturase 6.
      
 0.632
POMC
Proopiomelanocortin.
    
 0.571
BBS2
Bardet-Biedl syndrome 2.
     
 0.537
BBS4
Bardet-Biedl syndrome 4.
     
 0.527
SLCO1C1
Solute carrier organic anion transporter family member.
      
 0.504
BBS7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
     
 0.479
KLHL41
Kelch like family member 41.
     
 0.465
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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