Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C18H9orf16Uncharacterized protein. (100 aa)    
Predicted Functional Partners:
ATP6V1D
ATPase H+ transporting V1 subunit D.
    
   0.941
KRT20
Keratin 20; Belongs to the intermediate filament family.
    
   0.640
CEP290
Centrosomal protein 290.
    
   0.615
LRRC73
Leucine rich repeat containing 73.
      
 0.571
TEPSIN
TEPSIN adaptor related protein complex 4 accessory protein.
      
 0.545
CNST
Consortin, connexin sorting protein.
    
   0.538
VSIG10
V-set and immunoglobulin domain containing 10.
   
  
 0.530
ATP6V1E1
Uncharacterized protein.
    
 
 0.520
RNF20
E3 ubiquitin protein ligase.
    
   0.497
POLR3H
RNA polymerase III subunit H.
      
 0.469
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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