STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CGGBP1CGG triplet repeat binding protein 1. (167 aa)    
Predicted Functional Partners:
MRM1
Mitochondrial rRNA methyltransferase 1.
    
   0.821
ENSAPLP00000021068
Uncharacterized protein.
    
   0.805
FMR1
Fragile X mental retardation 1.
   
 0.713
GIN1
Gypsy retrotransposon integrase 1.
    
 0.678
URB1
URB1 ribosome biogenesis homolog.
      
 0.601
CLN8
TLC domain-containing protein.
    
 
 0.586
THAP12
THAP domain containing 12.
    
 0.577
APEX1
DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.
    
   0.538
DDB1
Damage specific DNA binding protein 1.
    
   0.531
TMEM209
Transmembrane protein 209.
      
 0.522
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.