STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U3I1K4_ANAPPSulfotransferase; Belongs to the sulfotransferase 1 family. (393 aa)    
Predicted Functional Partners:
LUM
Lumican.
     
 0.773
KERA
Keratocan.
     
 0.616
OGN
Osteoglycin.
     
 0.599
CHST13
Carbohydrate sulfotransferase.
   
  
 0.571
CHST9
Carbohydrate sulfotransferase.
      
 0.563
UBIAD1
UbiA prenyltransferase domain containing 1.
      
 0.559
CHST12
Carbohydrate sulfotransferase.
      
 0.548
U3I1W8_ANAPP
Carbohydrate sulfotransferase.
      
 0.548
ST3GAL6
ST3 beta-galactoside alpha-2,3-sialyltransferase 6; Belongs to the glycosyltransferase 29 family.
      
 0.529
NTAN1
N-terminal asparagine amidase.
      
 0.485
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.