Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TOR4ATorsin family 4 member A. (577 aa)    
Predicted Functional Partners:
SUMF1
Sulfatase modifying factor 1.
      
 0.767
SPART
Spartin.
      
 0.669
FERMT2
PH domain-containing protein.
     
 0.608
AHSG
Alpha 2-HS glycoprotein.
    
 0.592
PDLIM1
PDZ and LIM domain 1.
      
 0.547
PSMF1
Proteasome inhibitor subunit 1.
      
 0.491
CLPX
Caseinolytic mitochondrial matrix peptidase chaperone subunit.
      
 0.485
ENSAPLP00000022080
Uncharacterized protein.
      
 0.466
SERPING1
Serpin family G member 1; Belongs to the serpin family.
     
 0.429
U3IAV1_ANAPP
Plastocyanin-like domain-containing protein.
     
  0.412
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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