Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TNFAIP8L3TNF alpha induced protein 8 like 3. (195 aa)    
Predicted Functional Partners:
AP4E1
Adaptor related protein complex 4 subunit epsilon 1.
      
 0.702
SUSD6
Sushi domain containing 6.
      
 0.669
ANKRD9
Ankyrin repeat domain 9.
      
 0.664
GLDN
Gliomedin.
      
 0.602
LYSMD2
LysM domain containing 2.
      
 0.577
LMCD1
LIM and cysteine rich domains 1.
    
 
 0.570
SEMA6D
Semaphorin 6D; Belongs to the semaphorin family.
      
 0.554
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
      
 0.547
ELMOD1
ELMO domain containing 1.
      
 0.547
FAM174B
Family with sequence similarity 174 member B.
      
 0.546
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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