STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRIF1Ligand dependent nuclear receptor interacting factor 1. (773 aa)    
Predicted Functional Partners:
SDAD1
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
      
 0.748
RRP15
Ribosomal RNA processing 15 homolog.
      
 0.748
ZNF512
Zinc finger protein 512.
      
 0.748
SRBD1
S1 RNA binding domain 1.
      
 0.635
SMCHD1
Structural maintenance of chromosomes flexible hinge domain containing 1.
    
 
 0.634
ZNF362
Zinc finger protein 362.
      
 0.624
PDS5A
PDS5 cohesin associated factor A.
      
 0.610
CBX8
Chromobox 8.
      
 0.609
ZNF451
Zinc finger protein 451.
      
 0.602
PDS5B
PDS5 cohesin associated factor B.
      
 0.555
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.