STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPEPL1Aminopeptidase like 1. (523 aa)    
Predicted Functional Partners:
STX16
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
 
 
  
 0.929
PRPF19
Pre-mRNA processing factor 19.
    
 
 0.705
RIPOR2
PL48 domain-containing protein.
      
 0.665
USP39
Ubiquitin specific peptidase 39.
      
 0.638
NELFCD
Negative elongation factor complex member C/D.
   
  
 0.599
RNF145
Ring finger protein 145.
      
 0.599
ENSAPLP00000030534
RING-type domain-containing protein.
      
 0.599
HIPK3
Homeodomain interacting protein kinase 3.
    
 
 0.595
ATRIP
ATR interacting protein.
    
 
 0.588
DCAKD
Dephospho-CoA kinase domain containing.
  
  
 0.568
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.