Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCG2Secretogranin II. (660 aa)    
Predicted Functional Partners:
CHGB
Chromogranin B.
   
  
 0.946
SCG5
Secretogranin V.
   
  
 0.805
SCG3
Secretogranin III.
   
 
 0.760
U3I8P5_ANAPP
Uncharacterized protein.
   
  
 0.689
U3IV85_ANAPP
IlGF domain-containing protein.
      
 0.648
DOC2B
Double C2 domain beta.
   
  
 0.621
PCSK1
Proprotein convertase subtilisin/kexin type 1; Belongs to the peptidase S8 family.
   
  
 0.593
FAM20C
FAM20C golgi associated secretory pathway kinase.
     
  0.551
ENSAPLP00000028354
Uncharacterized protein.
     
  0.551
SNCA
Alpha-synuclein; Belongs to the synuclein family.
   
  
 0.543
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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