STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFEMP1EGF containing fibulin extracellular matrix protein 1. (724 aa)    
Predicted Functional Partners:
FKBP10
Peptidylprolyl isomerase.
   
 0.619
MFAP5
Microfibril associated protein 5.
   
 
 0.579
ECHDC3
Enoyl-CoA hydratase domain containing 3.
      
 0.562
PI15
Peptidase inhibitor 15; Belongs to the CRISP family.
   
  
 0.545
ENSAPLP00000025208
Uncharacterized protein.
   
 0.518
SMARCA2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2.
    
 
 0.495
ENSAPLP00000025521
Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.
   
  
 0.485
CYTL1
Cytokine like 1.
      
 0.482
FKBP9
Peptidylprolyl isomerase.
   
 0.477
FSTL1
Follistatin like 1.
   
  
 0.477
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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