STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GP9Glycoprotein IX platelet. (197 aa)    
Predicted Functional Partners:
GP1BB
Glycoprotein Ib platelet subunit beta.
   
0.895
GP1BA
LRRCT domain-containing protein.
   
 0.887
CCDC88A
Coiled-coil domain containing 88A.
    
 
 0.752
TRAPPC8
Trafficking protein particle complex 8.
      
 0.748
UTP18
UTP18 small subunit processome component.
      
 0.748
ENSAPLP00000024192
Uncharacterized protein.
   
0.660
ENSAPLP00000028530
LRRCT domain-containing protein.
   
0.660
ENSAPLP00000032148
LRRCT domain-containing protein.
   
0.660
BACH2
BTB domain and CNC homolog 2.
      
 0.630
F2
Uncharacterized protein; Belongs to the peptidase S1 family.
    
 0.630
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.